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The Construction and Applications of Phytohormones Bioinformatic Platform

Author: ChengPeng
Tutor: XiaoLangTao
School: Hunan Agricultural University
Course: Biophysics
Keywords: Plant hormones Two database Bioinformatics platform Silico cloning XML
CLC: Q946
Type: Master's thesis
Year: 2009
Downloads: 85
Quote: 0
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Abstract


In recent years , bioinformatics has been an unprecedented development , has become the forefront of today 's life sciences and hot . In-depth study on the biology of plant hormones , has generated a flood of data , therefore , data collection and collation of the plant hormone-related genes and their protein imperative . In this study, the NCBI ( National Center FOR Biotechnology Information) maintenance of a database as a source of information data , according to the plant hormone-related information content of the database is designed to part of the genes, proteins , sequences, and Document 4 , for the first time to build the two databases based on plant hormones biological information platform , the main content and the results are as follows : the edited program will get information on the Web to XML (Extensible Markup Language) as an intermediate format to save the bulk storage and XML data mapping relational data to improve database construction efficiency. 2429 gene sequences collected 115,022 nucleic acid sequences , 14 122 protein sequences and 140,538 documented . 2 to achieve the statistical functions of the secondary database retrieval and classification of the plant hormone . Including the gene library, a nucleic acid library , a protein library and Library Search , according to the name of the plant hormones , plant hormones in organs distribution plant body chromosome distribution , as well as the classification of the plant hormone-related gene information and regulatory phenotype STATS , which can be used to assist researchers to determine the direction and strategy . Establish a local the electronic clone analysis platform . Binding protein ABP1 by electronic cloning Rice auxin and growth of rice auxin receptor TIR1 similar gene cDNA bioinformatic analysis showed that the bioinformatics analysis platform from network restrictions , easy to use , has good feasibility and guidance sex . 4 . Advisory system for determination of plant hormones . Including the plant hormone extraction method database , the routine determination of plant hormones database , plant hormones biosensors database , provide technical advisory services for the determination of plant hormones .

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CLC: > Biological Sciences > Botany > Plant Biochemistry
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