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Characteristic Expression of cDNAs Induced during Late Zygotene-pachytene Stages of Microsporocytes in Lily Anthers
Author: WangShaoBo
Tutor: LiuHeng
School: Lanzhou University
Course: Cell Biology
Keywords: Lanzhou Lily Meiotic prophase I Suppression subtractive hybridization Reverse Northern dot blot hybridization Quantitative PCR
CLC: Q943
Type: Master's thesis
Year: 2009
Downloads: 85
Quote: 0
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Abstract
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The plant meiotic prophase I is a very complex process , and late zygotene and pachytene is a critical period for completion of the homologous chromosomes Association and restructuring . Lanzhou lily as the research object , by suppression subtractive hybridization ( SSH ) method , separation and analysis of pollen mother cells in Lanzhou lily medicine late zygotene to pachytene significantly upregulated ESTs , using real-time quantitative PCR and the original in situ hybridization analysis of these ESTs corresponding to the gene expression profiles and the temporal and spatial expression characteristics , the purpose is to further understand the biological process of meiotic prophase I provide some useful information . The main findings are as follows : using suppression subtractive hybridization ( SSH ) analysis method to the specific the lilies drug development period - pollen mother cells in late zygotene to pachytene subtracted libraries for Tester in prior to Driver, and after two periods at the same time building a reverse library . Use reverse Northern dot blot hybridization to find positive clones screened out significantly up-regulated expression of 132 ESTs and sequenced , clustering and sequence assembly , get 34 ESTs stitching results , GenBank, BLASTN and BLASTX analysis , proved 34 there are the 18 sequences Cenbank database sequence ESTs with significant homology . Classification, in accordance with the MIPS classification criteria the reference GO classification criteria, the difference obtained expression ESTs were annotated and classification , will have significant homology ESTs related metabolic divided according to their function , protein modification , and signal transduction eight categories . Real-Time PCR analysis of the expression level of 12 ESTs , further quantitative research was supported by ESTs represent gene in meiotic prophase I late zygotene to pachytene anthers and other organizations expression . BH1 - 1 - high - frequency f9 ( LIM12 mRNA ) in the SSH library in situ hybridization analysis , combined with its Real-Time PCR data , initially revealed the gene expression patterns . We use the method of suppression subtractive hybridization screening in the prophase Ⅰ late zygotene to pachytene anthers upregulated ESTs, most of them unknown ESTs corresponding to the function of the gene is unclear, further research is needed for the study of meiotic prophase I provide some valuable reference information .
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CLC: > Biological Sciences > Botany > Plant Cell Genetics
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